Other (131)
- 260/230 - 260/230 (phv00394105.v1.p1)
- 260/280 - 260/280 (phv00394104.v1.p1)
- ACTUAL_TIME_IN_FIXATIVE - Actual time in fixative (phv00393998.v1.p1)
- Analyte Type - Sample Type (phv00394100.v1.p1)
- AnonID - AnonID (phv00393987.v1.p1)
- APPEARANCE - Gross appearance of material sent to tissue bank (phv00394023.v1.p1)
- AREA_PERCENTAGE - Percentage of gross area of necrosis of material sent to tissue bank (phv00394021.v1.p1)
- Bioanalyzer File - Bioanalyzer File (phv00394108.v1.p1)
- Body Site - Primary tissue type, Primary Organ (phv00393989.v1.p1)
- Comments - Comments (phv00394115.v1.p1)
- CONSISTENT_LOCAL_PRC - This slide is consistent with the findings of the Diagnostic Pathology Report for this case; This slide is consistent with the findings of the local BSS pathologist (phv00394067.v1.p1)
- CONSISTENT_LOCAL_PRC.1 - CONSISTENT_LOCAL_PRC.1 (phv00394090.v1.p1)
- CONTENT_PERCENTAGE - Percentage of tumor content of material sent to tissue bank (phv00394022.v1.p1)
- Date of Distribution - Date of Distribution (phv00394113.v1.p1)
- DATE_SAMPLE_FROZEN - Date/Time the tissue sample was frozen in liquid nitrogen (phv00393992.v1.p1)
- DELAY_TO_FIXATION_TIME - Delay to fixation time (phv00393997.v1.p1)
- Descriptor - Descriptor (phv00394101.v1.p1)
- DETAIL - Specify types and % (phv00394045.v1.p1)
- DETAIL_PRC - Specify types and % (phv00394073.v1.p1)
- DIAGNOSIS - Gross diagnosis of resected tissue (phv00394010.v1.p1)
- DIMEN_MEET_CRITERIA - Do the dimensions of each experimental piece meet the criteria specified within the BPV surgical tissue collection and preservation procedure (phv00394037.v1.p1)
- DISEASE_OBSERVED - Gross appearance of disease was observed in resected tissue (phv00394009.v1.p1)
- Distributed to - Distributed to (phv00394112.v1.p1)
- DNA KAPA Batch Filename - DNA KAPA Batch Filename (phv00394111.v1.p1)
- DNA KAPA Q129/Q41 Ratio - DNA KAPA Q129/Q41 Ratio (phv00394109.v1.p1)
- DNA KAPA Q305/Q41 Ratio - DNA KAPA Q305/Q41 Ratio (phv00394110.v1.p1)
- EXCESS_RELEASED - Tumor tissue was released to the tissue bank (phv00394011.v1.p1)
- EXCESSD - Dimensions of tissue (phv00394014.v1.p1)
- EXCESSH - Dimensions of tissue (phv00394012.v1.p1)
- EXCESSW - Dimensions of tissue (phv00394013.v1.p1)
- Freeze / Thaw Cycles - Freeze / Thaw Cycles (phv00394114.v1.p1)
- FT_ADDL_TUMOR - Allocated for processing as (phv00394020.v1.p1)
- FTM1 - Allocated for processing as (phv00394015.v1.p1)
- FTM2 - Allocated for processing as (phv00394016.v1.p1)
- FTM3 - Allocated for processing as (phv00394017.v1.p1)
- FTM4 - Allocated for processing as (phv00394018.v1.p1)
- FTM5 - Allocated for processing as (phv00394019.v1.p1)
- GRADE - Histologic Grade (WHO Grading System) ; Two-Tier Grading System Grade; Histologic Grade (Fuhrman Nuclear Grading System); AJCC 7th Edition Histologic Grade (phv00394059.v1.p1)
- GRADE_PRC - Histologic Grade (WHO Grading System) ; Two-Tier Grading System Grade; Histologic Grade (Fuhrman Nuclear Grading System); AJCC 7th Edition Histologic Grade (phv00394086.v1.p1)
- GRADING_SYSTEM - What histologic grading system was applied (phv00394058.v1.p1)
- GRADING_SYSTEM_PRC - What histologic grading system was applied (phv00394085.v1.p1)
- HISTO_ELIGIBLE - Did pathology review of the H and E slide derived from QC FFPE tumor tissue confirm the histological type to be eligible for BPV study (phv00394064.v1.p1)
- HISTO_ELIGIBLE_PRC - Did pathology review of the H and E slide derived from QC FFPE tumor tissue confirm the histological type to be eligible for BPV study (phv00394087.v1.p1)
- Histologic type - Histologic type (phv00394099.v1.p1)
- HISTOLOGIC_TYPE_PRC - Histologic type (phv00394071.v1.p1)
- Histological Type - Histologic type (phv00394043.v1.p1)
- IS_TUMOR - Tumor status of sample (phv00394116.v1.p1)
- MEETS_CRITERIA - This slide meets the microscopic analysis criteria of the BPV project of necrosis percentage of less than 20% and tumor content of about 50% tumor cells by surface area (phv00394065.v1.p1)
- MEETS_CRITERIA_PRC - This slide meets the microscopic analysis criteria of the BPV project of necrosis percentage of less than 20% and tumor content of about 50% tumor nuclei (phv00394088.v1.p1)
- MEETS_CRITERIA_SAMPLE - This slide meets the microscopic analysis criteria for the BPV project of less than 20% necrosis and tumor content of about 50% tumor nuclei (phv00394093.v1.p1)
- METHOD_OF_FREEZING - Method of Freezing (phv00393993.v1.p1)
- MODULE - MODULE (phv00393990.v1.p1)
- Nanodrop Conc (ng/ul) - Nanodrop Conc (ng/ul) (phv00394103.v1.p1)
- NON_CELLULAR_DESC - If present, describe non-cellular component (phv00394056.v1.p1)
- NORMAL_ADJ_RELEASED - Normal adjacent tissue was released to the tissue bank in addition to tumor tissue? (phv00394038.v1.p1)
- NORMAL_ADJD - Dimensions of tissue (phv00394041.v1.p1)
- NORMAL_ADJH - Dimensions of tissue (phv00394039.v1.p1)
- NORMAL_ADJW - Dimensions of tissue (phv00394040.v1.p1)
- Organ - Organ (phv00394098.v1.p1)
- ORGAN_ORIGIN_PRC - Organ of origin (phv00394070.v1.p1)
- OTHER_HISTOLOGIC_TYPE - Specify type (phv00394044.v1.p1)
- OTHER_HISTOLOGIC_TYPE_PRC - Specify type: (phv00394072.v1.p1)
- PATH_METASTASES - CM: Pathologic Spread Distant Metastases (AJCC 7th Edition) (phv00394062.v1.p1)
- PATH_NODES - PN: Pathologic Spread Lymph Nodes (AJCC 7th Edition) (phv00394061.v1.p1)
- PATH_STAGE - Pathologic Tumor Stage Grouping (FIGO) (phv00394063.v1.p1)
- PATH_TUMOR - PT: Pathologic Spread Primary Tumor (AJCC 7th Edition) (phv00394060.v1.p1)
- PCT_NECROTIC_TISSUE - Percent of cross-sectional surface area of entire slide composed of necrotic tissue (phv00394051.v1.p1)
- PCT_NECROTIC_TISSUE_PRC - Percent of cross-sectional surface area of entire slide composed of necrotic tissue (phv00394079.v1.p1)
- PCT_NECROTIC_TUMOR - Percent necrotic tumor by surface area (phv00394053.v1.p1)
- PCT_NECROTIC_TUMOR_PRC - Percent Necrotic Tumor by surface area (phv00394081.v1.p1)
- PCT_NON_CELLULAR - Percent non-cellular component by surface area (i.e., mucin, hemorrhage, blood clot, etc.) (phv00394055.v1.p1)
- PCT_NON_CELLULAR_PRC - Percent Non-Cellular Component by surface area (i.e., mucin, hemorrhage, blood clot, etc.) (phv00394083.v1.p1)
- PCT_TUMOR_AREA - Percent of cross-sectional surface area of entire slide composed of tumor focus (includes necrotic tumor) (phv00394049.v1.p1)
- PCT_TUMOR_AREA_PRC - Percent of cross-sectional surface area of entire slide composed of tumor focus (Includes necrotic tumor) (phv00394077.v1.p1)
- PCT_TUMOR_CELLULARITY - Percent of tumor nuclei by cell count of the entire slide (number of tumor epithelial cell nuclei as compared to all cell nuclei) (phv00394050.v1.p1)
- PCT_TUMOR_CELLULARITY_PRC - Percent of tumor nuclei by cell count of the entire slide (number of tumor epithelial cell nuclei as compared to all cell nuclei): (phv00394078.v1.p1)
- PCT_VIABL_TUMOR - Percent viable tumor by surface area (not including stroma) (phv00394052.v1.p1)
- PCT_VIABL_TUMOR_PRC - Percent Viable Tumor by surface area (not including stroma) (phv00394080.v1.p1)
- PCT_VIABLE_NON_TUMOR - Percent tumor stroma by surface area (phv00394054.v1.p1)
- PCT_VIABLE_NON_TUMOR_PRC - Percent Tumor Stroma by surface area (phv00394082.v1.p1)
- PERC_TUMOR - Percent tumor nuclei (phv00394094.v1.p1)
- PROTOCOL - Experimental Protocol A-D AND QC FFPE (Middle Left) Section (phv00393991.v1.p1)
- Protocol Definition - Protocol Definition (phv00394097.v1.p1)
- Protocol_1 - Protocol (phv00394095.v1.p1)
- Qubit Conc (ng/ul) - Qubit Conc (ng/ul) (phv00394106.v1.p1)
- REASON_NOT_CONS - Specify findings (phv00394068.v1.p1)
- REASON_NOT_CONS_PRC - Specify findings (phv00394091.v1.p1)
- REASON_NOT_MEET - Specify findings (phv00394066.v1.p1)
- REASON_NOT_MEET_PRC - Specify findings (phv00394089.v1.p1)
- RESECTION_WEIGHT - Weight of resection (phv00394008.v1.p1)
- RESECTIOND - Dimensions of resection (phv00394007.v1.p1)
- RESECTIONH - Dimensions of resection (phv00394005.v1.p1)
- RESECTIONW - Dimensions of resection (phv00394006.v1.p1)
- RIN - RIN (phv00394107.v1.p1)
- ROOM_HUMIDITY - Humidity of pathology gross room when specimen arrived from OR (phv00394004.v1.p1)
- ROOM_TEMPERATURE - Temperature of pathology gross room when specimen arrived from OR (phv00394003.v1.p1)
- SAME_ORIGIN_TYPE - Organ of origin and histologic type are the same as the QC section (phv00394092.v1.p1)
- SAMPLE_ID - Aliquot ID (phv00393986.v1.p1)
- SARCOMATOID - Presence of Sarcomatoid features (phv00394046.v1.p1)
- SARCOMATOID_DESC - Describe Sarcomatoid features (phv00394047.v1.p1)
- SARCOMATOID_DESC_PRC - Describe Sarcomatoid features (phv00394075.v1.p1)
- SARCOMATOID_PRC - Presence of Sarcomatoid features (phv00394074.v1.p1)
- SEC_TISD - Dimensions of second piece of tumor tissue (if applicable) (phv00394027.v1.p1)
- SEC_TISH - Dimensions of second piece of tumor tissue (if applicable) (phv00394025.v1.p1)
- SEC_TISSUE_COLLECT - Was a second piece of tumor tissue collected (phv00394024.v1.p1)
- SEC_TISW - Dimensions of second piece of tumor tissue (if applicable) (phv00394026.v1.p1)
- SLIDE_MODULE - Slide ID examined by pathologist (phv00394042.v1.p1)
- SLIDE_MODULE_PRC - Slide ID examined by pathologist (phv00394069.v1.p1)
- SOP - BPV SOP governing transport of tissue from OR to pathology gross room (phv00394001.v1.p1)
- SPECIMEN_ID - SPECIMEN ID (phv00393988.v1.p1)
- ST_ADDL_TUMOR - Allocated for processing as (phv00394033.v1.p1)
- ST_APPEARANCE - Gross appearance of second piece of tumor tissue sent to tissue bank (if applicable) (phv00394036.v1.p1)
- ST_AREA_PERCENTAGE - Percentage of gross area of necrosis of second piece of tumor tissue sent to tissue bank (if applicable) (phv00394034.v1.p1)
- ST_CONTENT_PERCENTAGE - Percentage of tumor content of second piece of tumor tissue sent to tissue bank (if applicable) (phv00394035.v1.p1)
- STM1 - Allocated for processing as (phv00394028.v1.p1)
- STM2 - Allocated for processing as (phv00394029.v1.p1)
- STM3 - Allocated for processing as (phv00394030.v1.p1)
- STM4 - Allocated for processing as (phv00394031.v1.p1)
- STM5 - Allocated for processing as (phv00394032.v1.p1)
- Time - Time (phv00394096.v1.p1)
- TIME_PROC_END_EMBED_START - Time between tissue processor cycle completion and embedding (phv00393999.v1.p1)
- TIME_TRANSFERRED - Time Transferred (phv00393994.v1.p1)
- TISSUE_RECEIVED - Tissue received in gross room from OR (phv00394000.v1.p1)
- TOTAL - Histologic profile total % (should equal 100%) (phv00394057.v1.p1)
- TOTAL_PRC - Histologic Profile Total (phv00394084.v1.p1)
- TRANSFERRED_TO - Transferred to (phv00393995.v1.p1)
- TRANSPORT_PERFORMED - Transport of tissue was performed per BPV surgical tissue collection and preservation SOP (phv00394002.v1.p1)
- TUMOR_DIMENSION - Greatest tumor dimension on slide (phv00394048.v1.p1)
- TUMOR_DIMENSION_PRC - Greatest tumor dimension on slide (phv00394076.v1.p1)
- Volume (ul) - Volume (ul) (phv00394102.v1.p1)
- WEIGHT - Weight of frozen tumor block (phv00393996.v1.p1)