Crohn Disease study with RNA-Seq, RNA Seq (NGS) data on dbGaP (119 participants)

phs003156 — Developing Biomarkers Incorporating High Throughput RNA, DNA, Small RNA    Sequencing and Protein Expression in Inflammatory Bowel Disease Using    Formalin-Fixed, Paraffin-Embedded (FFPE) Tissue Samples

This study included pediatric patients with suspected inflammatory bowel disease (IBD) who underwent endoscopy between 2008 and 2012. This included 101 colonic tissue samples and 100 ileal tissue samples. Biopsies were obtained at the time of diagnosis, and patients were followed for a mean of 6 years to record clinical characteristics. These included baseline characteristics, such as age of diagnosis and initial Montreal classification, as well as outcomes, such as stricturing or fistulizing complications, disease remission, or progression to surgery.Genes with significant results in the non-IBD vs CD comparison in colonic tissue are listed in the "Links to Related Genes" section of this page.

Developing Biomarkers Incorporating High Throughput RNA, DNA, Small RNA    Sequencing and Protein Expression in Inflammatory Bowel Disease Using    Formalin-Fixed, Paraffin-Embedded (FFPE) Tissue Samples