Dental Caries: Whole Genome Association and Gene x Environment Studies

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Anthropometry (5)

Girth_Cm - Girth in centimeters (phv00090203.v3.p2)
Ht_M - Height in meters (phv00090201.v2.p2)
Ht_M - Height in meters (phv00165474.v1.p2)
Wt_Kg - Weight in kilograms (phv00090202.v2.p2)
Wt_Kg - Weight in kilograms (phv00165475.v1.p2)

Demographics (8)

Age_exam - Age at time of dental exam (phv00090199.v3.p2)
Age_Exam - Age at time of dental exam (phv00165472.v1.p2)
Birth_year - Calendar Year of Birth (phv00090200.v3.p2)
Birth_Year - Calendar Year of Birth (phv00165473.v1.p2)
SEX - Sex (phv00090196.v3.p2)
SEX - Sex of Individual (phv00165469.v1.p2)
SEX - Sex (phv00493136.v1.p2)
SEX - Subject's sex (phv00090282.v4.p2)

Disease Events (2)

DentalUtilizationChild - Have you been to the dentist in the past year? (phv00493149.v1.p2)
DentalUtilizationOlder - Have you been to a dentist in the last 3 years? (phv00493148.v1.p2)

Environment (2)

Home_NAF_lvl - Home fluoride level (phv00090266.v2.p2)
Watersource - Source of water (phv00090269.v2.p2)

Geography (3)

Site - Center where data was collected (phv00090194.v2.p2)
Site - Center where data were collected (phv00165466.v1.p2)
StateResidence - State participant resides in (phv00493137.v1.p2)

Race and Ethnicity (4)

EthnicityNIH - Ethnicity per NIH guidelines (phv00090198.v2.p2)
ETHNICITYNIH - Ethnicity per NIH guidelines (phv00165471.v1.p2)
RaceNIH - Race of Individual (phv00090197.v2.p2)
RACENIH - Race of Individual (phv00165470.v1.p2)

Socioeconomic (6)

demEducationDegree - What is your highest educational degree or certificate? (phv00493140.v1.p2)
demIncome - What is your annual income? (phv00493139.v1.p2)
DentalInsurance - Do you have dental insurance? (phv00493151.v1.p2)
Educ_group - Education group (phv00090263.v2.p2)
Income_3cat - Individual's yearly income in 3 categories from Iowa (phv00090264.v2.p2)
NumberChildrenLivingHome - Number of the children living in the home (phv00493138.v1.p2)

Substance Use (2)

Brushfreq - Tooth brushing frequency (phv00090268.v2.p2)
Brushfreq - Tooth brushing frequency (phv00165538.v1.p2)

Other (163)

ANALYTE_TYPE - Type of analyte used (DNA/RNA) (phv00219180.v1.p2)
AvoidanceAnticipatoryFear - Dental Fear and Anxiety - Avoidance and Anticipatory Fear subscale (phv00493144.v1.p2)
CAT1_PRIM_D1FT - Caries affection status for primary teeth (phv00090261.v2.p2)
CAT3_PERM_D2MFT - Caries affection status for permanent teeth with age-dependent thresholds (phv00090262.v2.p2)
Consent - Consent restrictions on type of research (phv00165467.v1.p2)
CONSENT - Consent group (phv00090275.v4.p2)
DentalFatalism - Dental Fatalism (phv00493143.v1.p2)
DentalNeglectScale - Dental Neglect Scale (phv00493142.v1.p2)
DentFearChildRev2 - Dental Fear and Anxiety - Child - Total Score (phv00493150.v1.p2)
Edentulous - Edentulous (phv00090204.v2.p2)
Edentulous - Edentulous (phv00165477.v1.p2)
Exam_Done - Dental exam completed (phv00090195.v2.p2)
Exam_Done - Dental exam completed (phv00165468.v1.p2)
FAMID - Family ID (phv00165465.v1.p2)
FAMID - Family ID (phv00090278.v4.p2)
FATHER - Father ID (phv00090280.v4.p2)
FearofSpecificDentalStimuli - Dental Fear and Anxiety - Fear of Specific Dental Stimuli subscale (phv00493145.v1.p2)
Fruit_juice_oz_day - Fruit juice consumed per day (phv00090270.v2.p2)
Fruit_juice_oz_day - Fruit juice consumed per day (phv00165540.v1.p2)
Girth_Cm - Girth in centimeters (phv00165476.v1.p2)
Home_NAF_lvl - Home fluoride level (phv00165536.v1.p2)
HSLDID - Household ID (phv00090193.v2.p2)
Income_3cat - Family's yearly income (US$) in 3 categories from Iowa (phv00165534.v1.p2)
Juice_oz_day - Other juice consumed per day (phv00090271.v2.p2)
Juice_oz_day - Other juice consumed per day (phv00165541.v1.p2)
MOTHER - Mother ID (phv00090281.v4.p2)
NeedDentalTx - Do you believe that any of your children need to have dental treatment right now? (phv00493141.v1.p2)
PD1 - Periodontal disease-related phenotype 1 (phv00219177.v2.p2)
PD2 - Periodontal disease-related phenotype 2 (phv00219178.v2.p2)
Perm_D1MFS - Total Permanent Surface caries with white spots (phv00090239.v2.p2)
PERM_D1MFS - Total Permanent Surface caries with white spots (phv00165512.v1.p2)
Perm_D1MFT - Total Permanent Tooth caries with white spots (phv00090231.v2.p2)
PERM_D1MFT - Total Permanent Tooth caries with white spots (phv00165504.v1.p2)
Perm_D2MFS - Total Permanent Surface caries without white spots (phv00090240.v2.p2)
PERM_D2MFS - Total Permanent Surface caries without white spots (phv00165513.v1.p2)
Perm_D2MFT - Total Permanent Tooth caries without white spots (phv00090232.v2.p2)
PERM_D2MFT - Total Permanent Tooth caries without white spots (phv00165505.v1.p2)
Perm_DS - Total Permanent Decayed Surfaces (phv00090236.v2.p2)
PERM_DS - Total Permanent Decayed Surfaces (phv00165509.v1.p2)
Perm_DT - Total Permanent Decayed Teeth (phv00090228.v2.p2)
PERM_DT - Total Permanent Decayed Teeth (phv00165501.v1.p2)
Perm_FS - Total Permanent Filled Surfaces (phv00090237.v2.p2)
PERM_FS - Total Permanent Filled Surfaces (phv00165510.v1.p2)
Perm_FT - Total Permanent Filled Teeth (phv00090229.v2.p2)
PERM_FT - Total Permanent Filled Teeth (phv00165502.v1.p2)
Perm_MS - Total Permanent Surfaces missing due to decay (phv00090238.v2.p2)
PERM_MS - Total Permanent Surfaces missing due to decay (phv00165511.v1.p2)
Perm_MT - Total Permanent Teeth missing due to decay (phv00090230.v2.p2)
PERM_MT - Total Permanent Teeth missing due to decay (phv00165503.v1.p2)
Perm_SS - Total Permanent Sound Surfaces (phv00090233.v2.p2)
PERM_SS - Total Permanent Sound Surfaces (phv00165506.v1.p2)
Perm_ST - Total Permanent Sound Teeth (phv00090225.v2.p2)
PERM_ST - Total Permanent Sound Teeth (phv00165498.v1.p2)
Perm_SWS - Total Permanent Sound Surfaces + surfaces with white spots (phv00090234.v2.p2)
PERM_SWS - Total Permanent Sound Surfaces + surfaces with white spots (phv00165507.v1.p2)
Perm_SWT - Total Permanent Sound Teeth + teeth with white spots (phv00090226.v2.p2)
PERM_SWT - Total Permanent Sound Teeth + teeth with white spots (phv00165499.v1.p2)
Perm_Tot_Surface_Present - Total Permanent Surfaces Present (phv00090224.v2.p2)
Perm_Tot_Surface_Present - Total Permanent Surfaces Present (phv00165497.v1.p2)
Perm_Tot_Teeth_Present - Total Permanent Teeth Present (phv00090223.v2.p2)
Perm_Tot_Teeth_Present - Total Permanent Teeth Present (phv00165496.v1.p2)
Perm_WS - Total Permanent Surfaces with white spots (phv00090235.v2.p2)
PERM_WS - Total Permanent Surfaces with white spots (phv00165508.v1.p2)
Perm_WT - Total Permanent Teeth with white spots (phv00090227.v2.p2)
PERM_WT - Total Permanent Teeth with white spots (phv00165500.v1.p2)
PhysiologicalArousal - Dental Fear and Anxiety - Physiological Arousal subscale (phv00493146.v1.p2)
Prim_d1fs - Total Primary Surface caries with white spots (phv00090221.v2.p2)
Prim_d1fs - Total Primary Surface caries with white spots (phv00165494.v1.p2)
Prim_d1ft - Total Primary Tooth caries with white spots (phv00090213.v2.p2)
Prim_d1ft - Total Primary Tooth caries with white spots (phv00165486.v1.p2)
Prim_d2fs - Total Primary Surface caries without white spots (phv00090222.v2.p2)
Prim_d2fs - Total Primary Surface caries without white spots (phv00165495.v1.p2)
Prim_d2ft - Total Primary Tooth caries without white spots (phv00090214.v2.p2)
Prim_d2ft - Total Primary Tooth caries without white spots (phv00165487.v1.p2)
Prim_ds - Total Primary Decayed Surfaces (phv00090218.v2.p2)
Prim_ds - Total Primary Decayed Surfaces (phv00165491.v1.p2)
Prim_dt - Total Primary Decayed Teeth (phv00090210.v2.p2)
Prim_dt - Total Primary Decayed Teeth (phv00165483.v1.p2)
Prim_fs - Total Primary Filled Surfaces (phv00090219.v2.p2)
Prim_fs - Total Primary Filled Surfaces (phv00165492.v1.p2)
Prim_ft - Total Primary Filled Teeth (phv00090211.v2.p2)
Prim_ft - Total Primary Filled Teeth (phv00165484.v1.p2)
Prim_ms - Total Primary Surfaces missing due to decay (phv00090220.v2.p2)
Prim_ms - Total Primary Surfaces missing due to decay (phv00165493.v1.p2)
Prim_mt - Total Primary Teeth missing due to decay (phv00090212.v2.p2)
Prim_mt - Total Primary Teeth missing due to decay (phv00165485.v1.p2)
Prim_ss - Total Primary Sound Surfaces (phv00090215.v2.p2)
Prim_ss - Total Primary Sound Surfaces (phv00165488.v1.p2)
Prim_st - Total Primary Sound Teeth (phv00090207.v2.p2)
Prim_st - Total Primary Sound Teeth (phv00165480.v1.p2)
Prim_sws - Total Primary Sound Surfaces + surfaces with with white spots (phv00090216.v2.p2)
Prim_sws - Total Primary Sound Surfaces + surfaces with white spots (phv00165489.v1.p2)
Prim_swt - Total Primary Sound Teeth + teeth with white spots (phv00090208.v2.p2)
Prim_swt - Total Primary Sound Teeth + teeth with white spots (phv00165481.v1.p2)
Prim_Tot_Surface_Present - Total Primary Surfaces Present (phv00090206.v2.p2)
Prim_Tot_Surface_Present - Total Primary Surfaces Present (phv00165479.v1.p2)
Prim_Tot_Teeth_Present - Total Primary Teeth Present (phv00090205.v2.p2)
Prim_Tot_Teeth_Present - Total Primary Teeth Present (phv00165478.v1.p2)
Prim_ws - Total Primary Surfaces with white spots (phv00090217.v2.p2)
Prim_ws - Total Primary Surfaces with white spots (phv00165490.v1.p2)
Prim_wt - Total Primary Teeth with white spots (phv00090209.v2.p2)
Prim_wt - Total Primary Teeth with white spots (phv00165482.v1.p2)
Pwd_bev_oz_day - Powdered beverage consumed per day (phv00090272.v3.p2)
Pwd_bev_oz_day - Powdered beverage consumed per day (phv00165542.v1.p2)
S_mutans - S mutans present (phv00090267.v2.p2)
S_mutans - S mutans present (phv00165537.v1.p2)
Saliva_flow - Saliva flow (phv00090265.v3.p2)
Saliva_flow - Saliva flow (phv00165535.v1.p2)
SAMP_SOURCE - Source repository where samples originate (phv00090285.v4.p2)
SAMPID - Sample genotyping instance ID (phv00090284.v4.p2)
SAMPID - Sample genotyping instance ID. (phv00219179.v1.p2)
Soda_oz_day - Soda consumed per day (phv00090273.v3.p2)
Soda_oz_day - Soda consumed per day (phv00165543.v1.p2)
SOURCE_SAMPID - Sample ID used in the Source Repository (phv00090286.v4.p2)
SOURCE_SUBJID - Subject ID at source (phv00090277.v4.p2)
SUBJ_SOURCE - Defines subject ID name space origin (phv00090276.v4.p2)
SUBJID - Geneva ID (phv00090192.v2.p2)
SUBJID - Geneva ID (phv00165464.v2.p2)
SUBJID - GENEVA ID (phv00090274.v4.p2)
SUBJID - Subject ID (GENEVA ID) (phv00090279.v4.p2)
SUBJID - GENEVA ID (phv00090283.v4.p2)
Tot_D1MFS - Total Surface caries with white spots (phv00090259.v2.p2)
TOT_D1MFS - Total Surface caries with white spots (phv00165532.v1.p2)
Tot_D1MFT - Total Tooth caries with white spots (phv00090250.v2.p2)
TOT_D1MFT - Total Tooth caries with white spots (phv00165523.v1.p2)
Tot_D1S - Total Decayed Surfaces with white spots (phv00090256.v2.p2)
TOT_D1S - Total Decayed Surfaces with white spots (phv00165529.v1.p2)
Tot_D1T - Total Decayed Teeth with white spots (phv00090247.v2.p2)
TOT_D1T - Total Decayed Teeth with white spots (phv00165520.v1.p2)
Tot_D2MFS - Total Surface caries without white spots (phv00090260.v2.p2)
TOT_D2MFS - Total Surface caries without white spots (phv00165533.v1.p2)
Tot_D2MFT - Total Tooth caries without white spots (phv00090251.v2.p2)
TOT_D2MFT - Total Tooth caries without white spots (phv00165524.v1.p2)
Tot_D2S - Total Decayed Surfaces without white spots (phv00090257.v2.p2)
TOT_D2S - Total Decayed Surfaces without white spots (phv00165530.v1.p2)
Tot_D2T - Total Decayed Teeth without white spots (phv00090248.v2.p2)
TOT_D2T - Total Decayed Teeth without white spots (phv00165521.v1.p2)
Tot_FS - Total Filled Surfaces (phv00090255.v2.p2)
TOT_FS - Total Filled Surfaces (phv00165528.v1.p2)
Tot_FT - Total Filled Teeth (phv00090246.v2.p2)
TOT_FT - Total Filled Teeth (phv00165519.v1.p2)
Tot_MS - Total Surfaces missing due to decay (phv00090258.v2.p2)
TOT_MS - Total Surfaces missing due to decay (phv00165531.v1.p2)
Tot_MT - Total Teeth missing due to decay (phv00090249.v2.p2)
TOT_MT - Total Teeth missing due to decay (phv00165522.v1.p2)
Tot_SS - Total Sound Surfaces (phv00090252.v2.p2)
TOT_SS - Total Sound Surfaces (phv00165525.v1.p2)
Tot_ST - Total Sound Teeth (phv00090243.v2.p2)
TOT_ST - Total Sound Teeth (phv00165516.v1.p2)
Tot_Surface_Present - Total Surfaces Present (phv00090242.v2.p2)
Tot_Surface_Present - Total Surfaces Present (phv00165515.v1.p2)
Tot_SWS - Total Sound Surfaces + surfaces with white spots (phv00090253.v2.p2)
TOT_SWS - Total Sound Surfaces + surfaces with white spots (phv00165526.v1.p2)
Tot_SWT - Total Sound Teeth + teeth with white spots (phv00090244.v2.p2)
TOT_SWT - Total Sound Teeth + teeth with white spots (phv00165517.v1.p2)
Tot_Teeth_Present - Total Teeth Present (phv00090241.v2.p2)
Tot_Teeth_Present - Total Teeth Present (phv00165514.v1.p2)
Tot_WS - Total Surfaces with white spots (phv00090254.v2.p2)
TOT_WS - Total Surfaces with white spots (phv00165527.v1.p2)
Tot_WT - Total Teeth with white spots (phv00090245.v2.p2)
TOT_WT - Total Teeth with white spots (phv00165518.v1.p2)
TotalDFSScore - Dental Fear and Anxiety Total Score (phv00493147.v1.p2)
Watersource - Source of water (phv00165539.v1.p2)