PAGE: Epidemiologic Architecture for Genes Linked to Environment (EAGLE) - BioVU Cancer Project

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Ancestry (9)

CEU_PC1 - 1st Principal components of CEU population (phv00196402.v1.p1)
CEU_PC2 - 2nd Principal components of CEU population (phv00196403.v1.p1)
CEU_PC3 - 3rd Principal components of CEU population (phv00196404.v1.p1)
CEU_PC4 - 4th Principal components of CEU population (phv00196405.v1.p1)
CEU_PC5 - 5th Principal components of CEU population (phv00196406.v1.p1)
ethnicity_assignment - Ethnicity from Genetic Ancestry (phv00196396.v1.p1)
pc1 - 1st Principal components of total population (phv00196399.v1.p1)
pc2 - 2nd Principal components of total population (phv00196400.v1.p1)
pc3 - 3rd Principal components of total population (phv00196401.v1.p1)

Demographics (2)

age - Age of participant (phv00196393.v1.p1)
sex - Gender of participant (phv00196394.v1.p1)

Disease Events (42)

breast_CEU - Breast: Whites (phv00196419.v1.p1)
breast_YRI - Breast: Blacks (phv00196420.v1.p1)
breastNoInsitu_CEU - BreastNoInsitu: Whites (phv00196421.v1.p1)
breastNoInsitu_YRI - BreastNoInsitu: Blacks (phv00196422.v1.p1)
Cancer_Diagnosis_Year - Year Cancer was diagnosed (phv00196410.v1.p1)
cancer_prevalent_status - Cancer: Yes or No (phv00196408.v1.p1)
Cancer_Sites - Type of Cancer (phv00196409.v1.p1)
cancer_stages - Cancer Stages: Local/Regional/Other (phv00196411.v1.p1)
colorectal_CEU - Colorectal: Whites (phv00196423.v1.p1)
colorectal_racecombined - Colorectal: All races (phv00196425.v1.p1)
colorectal_racecombinedSelf - Colorectal: All races (phv00196426.v1.p1)
colorectal_W - Colorectal: Whites (phv00196424.v1.p1)
endometrial - Endometrial: All races (phv00196449.v1.p1)
lung_CEU - Lung: Whites (phv00196427.v1.p1)
lung_racecombined - Lung: All races (phv00196431.v1.p1)
lung_racecombined_adeno - Adeno: All races (phv00196432.v1.p1)
lung_racecombined_largecell - Large_cell: All races (phv00196433.v1.p1)
lung_racecombined_smallcell - Amall_cell: All races (phv00196434.v1.p1)
lung_racecombined_squamous - Squamous: All races (phv00196435.v1.p1)
lungCode_racecombined - LungCode: All races (phv00196428.v1.p1)
lungSmoking_CEU - LungSmoking: Whites (phv00196429.v1.p1)
lungSmokingCode_CEU - LungSmokingCode: Whites (phv00196430.v1.p1)
melanoma_CEU - Melanoma: Whites (phv00196436.v1.p1)
melanomaNoInsitu_CEU - MelanomaNoInsitu: Whites (phv00196437.v1.p1)
multiple_primaries - Multiple: All races (phv00196438.v1.p1)
NHL_CEU - NHL: Whites (phv00196412.v1.p1)
NHL_CEU_SLL - NHL_SLL: Whites (phv00196413.v1.p1)
NHL_racecombined - NHL: All races (phv00196417.v1.p1)
NHL_racecombined_SLL - NHL_SLL: All races (phv00196418.v1.p1)
NHLFolicular_CEU - NHLFolicular: Whites (phv00196414.v1.p1)
NHLFolicular_racecombined - NHLFolicular: All races (phv00196415.v1.p1)
NHLFolicular_racecombinedSelf - NHLFolicular: All races (phv00196416.v1.p1)
ovarian_CEU - Ovarian: Whites (phv00196439.v1.p1)
ovarianSerous_CEU - OvarianSerous: Whites (phv00196440.v1.p1)
prostate_CEU - Prostate: Whites (phv00196441.v1.p1)
prostate_CEU_aggressive - Prostate_AGGRESSIVE: Whites (phv00196443.v1.p1)
prostate_CEU_grade - Prostate_GRADE: Whites (phv00196444.v1.p1)
prostate_CEU_stage - Prostate_STAGE: Whites (phv00196445.v1.p1)
prostate_YRI - Prostate: Blacks (phv00196442.v1.p1)
prostate_YRI_aggressive - Prostate_AGGRESSIVE: Blacks (phv00196446.v1.p1)
prostate_YRI_grade - Prostate_GRADE: Blacks (phv00196447.v1.p1)
prostate_YRI_stage - Prostate_STAGE: Blacks (phv00196448.v1.p1)

Race and Ethnicity (1)

race - Race of Participant (phv00196395.v1.p1)

Substance Use (2)

smoking - Smoking status: NLP Definition (phv00196397.v1.p1)
smokingcode - Smoking status: ICD9 Definition (phv00196398.v1.p1)

Other (12)

ANALTYE_TYPE - Analyte type (phv00196452.v1.p1)
BODY_SITE - Body site where sample was collected (phv00196451.v1.p1)
CONSENT - Consent group as determined by DAC (phv00196388.v1.p1)
followup_time - Follow-up time of cancer participant's visit (phv00196407.v1.p1)
HISTOLOGICAL_TYPE - Cell or tissue type or subtype of sample (phv00196454.v1.p1)
IS_TUMOR - Tumor status (phv00196453.v1.p1)
SAMPID - De-identified sample ID (phv00196450.v1.p1)
SAMPID - Sample ID (phv00196390.v1.p1)
SAMPLE_USE - Sample Use (phv00196391.v1.p1)
subjid - Subject ID (phv00196392.v1.p1)
SUBJID - Subject ID (phv00196389.v1.p1)
SUBJID - Subject ID (phv00196387.v1.p1)