Sequence-Based Analysis of Human Breast Tumors
Demographics (1)
- Age - Age (phv00196187.v2.p2)
Disease Events (16)
- AFFECTION_STATUS - Case control status of the subject (phv00196182.v2.p2)
- ER - ER (1=positive; 0=negative) (phv00196188.v2.p2)
- Grade - Grade (phv00196191.v2.p2)
- HER2 Status - HER2 Status (phv00334404.v1.p2)
- M Stage - M Stage (phv00334405.v1.p2)
- Node status - Node status (1=positive=1 or more nodes; 0=negative) (phv00196190.v2.p2)
- Overall survival event - Overall survival event (0=alive; 1=DOD or DOC) (phv00196195.v2.p2)
- Overall suvival months - Overall suvival months (phv00196196.v2.p2)
- PAM50_Subtype - PAM50 Subtype (phv00334407.v1.p2)
- PR - PR (1=positive; 0=negative) (phv00196189.v2.p2)
- RFS event - RFS event (0=no relapse; 1=relapsed at any site or died of disease) (phv00196193.v2.p2)
- RFS months - RFS months (phv00196194.v2.p2)
- Size - Tumor Size (1= <=2cm; 2= >2cm to <=5cm; 3= >5cm; 4=any size with direct extension to chest wall or skin) (phv00196192.v2.p2)
- TUMOR_GRADE - Tumor grade (phv00334409.v1.p2)
- TUMOR_STAGE - Tumor stage (phv00334408.v1.p2)
- TUMOR_TREATMENT - Tumor treatment (phv00334410.v1.p2)
Race and Ethnicity (1)
- Race - Race (phv00334406.v1.p2)
Other (19)
- ANALYTE_TYPE - Analyte type (phv00196201.v2.p2)
- BODY_SITE - Body site where sample was collected (phv00196200.v2.p2)
- CONSENT - Consent group as determined by DAC (phv00196179.v2.p2)
- EXTRACT_PROTOCOL - Protocols to extract total RNA (phv00196209.v2.p2)
- GEO_ACCESSION - GEO accession ID (phv00196198.v1.p2)
- HISTOLOGICAL_TYPE - Cell or tissue type or subtype of sample (phv00196203.v2.p2)
- IS_TUMOR - Tumor status (phv00196202.v2.p2)
- LIBRARY_CONSTRUCTION_PROTOCOL - Protocols to remove rRNA from sequencing library (phv00196208.v2.p2)
- PRIMARY_METASTATIC_TUMOR - Primary tumor, metastasis, or transformed cell line (phv00196204.v2.p2)
- PRIMARY_TUMOR_LOCATION - Primary tumor location (phv00196205.v2.p2)
- SAMPLE_ID - De-identified sample ID (phv00196199.v2.p2)
- SAMPLE_ID - Sample ID (phv00196184.v2.p2)
- SAMPLE_ID - Sample ID (phv00196197.v1.p2)
- SAMPLE_USE - Sample Use (phv00196185.v2.p2)
- SEQUENCING_CENTER - Name of the center which conducted sequencing (phv00196206.v2.p2)
- SUBJECT_ID - De-identified subject ID (phv00196186.v2.p2)
- SUBJECT_ID - Subject ID (phv00196178.v2.p2)
- SUBJECT_ID - Subject ID (phv00196183.v2.p2)
- TISSUE_TYPE - Type of tissues to extract total RNA for library construction (phv00196207.v2.p2)