NHLBI TOPMed: Genetics of Cardiometabolic Health in the Amish

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Anthropometry (5)

bmi_baseline - Body mass index at baseline visit (phv00252983.v1.p1)
height_baseline - Height at baseline visit (phv00252982.v1.p1)
waist_baseline - Waist circumference at baseline visit (phv00252980.v1.p1)
weight_baseline - Weight at baseline visit (phv00252979.v1.p1)
whr_baseline - Waist hip ratio at baseline visit (phv00252981.v1.p1)

Biomarkers (27)

basophils_baseline - Basophils value at baseline visit (phv00253015.v1.p1)
creatinine_baseline - Serum creatinine value at baseline visit (phv00253016.v1.p1)
crp_baseline - CRP value at baseline visit (phv00252992.v1.p1)
dbp_baseline - Diastolic blood pressure at baseline visit (phv00252996.v1.p1)
ekg_hr_baseline - Heart rate measured by electrocardiogram at baseline visit (phv00253005.v1.p1)
ekg_pr_baseline - PR interval measured by electrocardiogram at baseline visit (phv00253004.v1.p1)
ekg_qrs_baseline - QRS duration measured by electrocardiogram at baseline visit (phv00253002.v1.p1)
ekg_qt_baseline - QT interval measured by electrocardiogram at baseline visit (phv00253003.v1.p1)
eosinophils_baseline - Eosinophils value at baseline visit (phv00253014.v1.p1)
fastglucose_baseline - Fasting glucose value at baseline visit (phv00253001.v1.p1)
fastinsulin_baseline - Fasting insulin value at baseline visit (phv00253000.v1.p1)
fibrinogen_baseline - Fibrinogen value at baseline visit (phv00252991.v1.p1)
hdl_baseline - HDL value at baseline visit (phv00253018.v1.p1)
hematocrit_baseline - Hematocrit value at baseline visit (phv00253008.v1.p1)
hemoglobin_baseline - Hemoglobin value at baseline visit (phv00253007.v1.p1)
il6_baseline - IL6 value at baseline visit (phv00252993.v1.p1)
ldl_baseline - LDL value as calculated by Friedewald equation at baseline visit (phv00253017.v1.p1)
lpa_baseline - Lipoprotein A value at baseline visit (phv00252994.v1.p1)
lymphocytes_baseline - Lymphocytes value at baseline visit (phv00253013.v1.p1)
monocytes_baseline - Monocytes value at baseline visit (phv00253012.v1.p1)
neutrophils_baseline - Neutrophils value at baseline visit (phv00253011.v1.p1)
platelet_count_baseline - Platelet count at baseline visit (phv00253009.v1.p1)
red_blood_cell_count_baseline - Red blood cell count value at baseline visit (phv00253010.v1.p1)
sbp_baseline - Systolic blood pressure at baseline visit (phv00252995.v1.p1)
totchol_baseline - Total cholesterol value at baseline visit (phv00253020.v1.p1)
trigs_baseline - Triglycerides value at baseline visit (phv00253019.v1.p1)
white_blood_cell_count_baseline - White blood cell count value at baseline visit (phv00253006.v1.p1)

Demographics (5)

age_at_dna - Age at blood draw (phv00252977.v1.p1)
age_baseline - Age at baseline study (phv00252976.v1.p1)
cac_score_age - Age when CAC score was obtained (phv00252987.v1.p1)
SEX - Sex of participant (phv00252975.v1.p1)
SEX - Sex (phv00266363.v2.p1)

Disease Events (3)

mi_baseline - Self report heart attack at baseline visit (phv00252984.v1.p1)
stroke_baseline - Self report stroke at baseline visit (phv00252985.v1.p1)
t2diabetes_baseline - Has Type 2 diabetes based on medication, self-report, fasting glucose at baseline visit (phv00252998.v1.p1)

Imaging (3)

cac_agatston_score - Coronary artery calcification score (phv00252986.v1.p1)
imt_anyplaque_baseline - Any presence of carotid plaque as measured by IMT at baseline visit (phv00252989.v1.p1)
imt_mean_farwall_cca_baseline - Carotid intima-media far wall thickness at baseline visit (phv00252988.v1.p1)

Medications (3)

htn_med_baseline - Taking medication for hypertension at baseline visit (phv00252997.v1.p1)
lipid_med_baseline - Taking medication for hypercholesterolemia at baseline visit (phv00253021.v1.p1)
t2d_med_baseline - Taking medication for type 2 diabetes at baseline visit (phv00252999.v1.p1)

Respiratory (2)

fev1_pre_bd_baseline - Forced expiratory volume in 1 second measured by spirometry at baseline visit (phv00253023.v1.p1)
fvc_pre_bd_baseline - Forced vital capacity measured by spirometry at baseline visit (phv00253022.v1.p1)

Study Administration (1)

baseline_study - Phenotype study (phv00252974.v1.p1)

Substance Use (1)

current_smoker_baseline - Current smoking status of participant at baseline visit (phv00252990.v1.p1)

Other (24)

ANALYTE_TYPE - Analyte Type (phv00253026.v2.p1)
BODY_SITE - Body site where sample was collected (phv00253025.v2.p1)
CONSENT - Consent group as determined by DAC (phv00252969.v1.p1)
DEGREE2 - Individual has unidentified second degree relationship with at least one other pedigree that is not represented in the pedigree information given. (phv00266365.v2.p1)
FAMILY_ID - Family ID (phv00266359.v2.p1)
FATHER - Father's Subject ID (phv00266361.v2.p1)
Funding_Source - Funding for WGS - TOPMed (phv00282734.v1.p1)
HISTOLOGICAL_TYPE - Cell or tissue type or subtype of sample (phv00253027.v2.p1)
IS_TUMOR - Tumor status (phv00253028.v2.p1)
MOTHER - Mother's Subject ID (phv00266362.v2.p1)
MZTWIN - Twin ID (phv00266364.v2.p1)
pregnant_baseline - Pregnant at baseline visit (phv00252978.v1.p1)
SAMPLE_ID - De-identified sample ID (phv00253024.v2.p1)
SAMPLE_ID - Sample ID (phv00252971.v2.p1)
SEQUENCING_CENTER - Sequencing center where whole genome sequencing took place - BROAD (phv00282733.v1.p1)
SOURCE_SUBJECT_ID - Previous dbGaP submission Subject ID (phv00259064.v1.p1)
Study_Name - Name of dbGaP study - Amish (phv00282737.v1.p1)
SUBJECT_ID - De-identified Subject ID (phv00252973.v1.p1)
SUBJECT_ID - Unique Subject ID (phv00266360.v2.p1)
SUBJECT_ID - Subject ID (phv00252968.v1.p1)
SUBJECT_ID - Subject ID (phv00252970.v2.p1)
SUBJECT_SOURCE - Subject also included in previous dbGaP submission (phv00259063.v1.p1)
TOPMed_Phase - Phase of TOPMed - Phase 1 (phv00282735.v1.p1)
TOPMed_Project - Name of TOPMed project - Amish (phv00282736.v1.p1)