Geisinger Health System - MyCode, eMERGE III Exome Chip

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Anthropometry (4)

Case_Control_ExOb - Case - control status for Extreme Obesity (phv00252044.v1.p1)
Height_Median - Median height used in algorithm (phv00252053.v1.p1)
Unintentional_Weight_Loss_Causes - Flag indicating Unintentional Weight Loss Causes. Either on problem list or >=4 dx on different days from OP/IP encounters (phv00252084.v1.p1)
Weight_Most_Recent_BMI - Most recent weight used in algorithm (phv00252054.v1.p1)

Demographics (5)

Age_At_AAA - Age at time of diagnosis for cases, at time of enrollment in biobank for controls (phv00252046.v1.p1)
Age_At_Most_Recent_BMI - At the time of most recent BMI for cases and controls (phv00252049.v1.p1)
Decade_of_Birth - Decade of birth of participant (phv00252047.v1.p1)
Sex - Sex of participant (phv00252050.v1.p1)
Year_Birth - Year of birth of participant (phv00252048.v1.p1)

Disease Events (43)

Anemia - Flag indicating Anemia .Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252102.v1.p1)
Aplastic_Anemia - Flag indicating Aplastic Anemia. Either on problem list or >=4 dx on different days from OP/IP encounters (phv00252071.v1.p1)
Benign_Neoplasms - Flag indicating Benign Neoplasm. Either on problem list or >=4 dx on different days from OP/IP encounters (phv00252058.v1.p1)
Case_Control_AAA - Case - control status for AAA (phv00252043.v1.p1)
Cerebrovascular_Disease - Flag indicating Cerebrovascular Disease. Either on problem list or >=4 dx on different days from OP/IP encounters (phv00252059.v1.p1)
Chronic_Diarrhea - Flag indicating Chronic Diarrhea. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252093.v1.p1)
Chronic_liver_disease - Flag indicating Chronic liver disease. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252110.v1.p1)
Chronic_Liver_Disease_Cirrhosis - Flag indicating Chronic liver disease / Cirrhosis. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252097.v1.p1)
COPD - Flag indicating COPD. Either on problem list or >=4 dx on different days from OP/IP encounters (phv00252064.v1.p1)
CVA - Flag indicating CVA (Cerebrovascular Accident ). Either on problem list or >=4 dx on different days from OP/IP encounters (phv00252066.v1.p1)
Dementia - Flag indicating Dementia. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252090.v1.p1)
Diabetes - Flag indicating Diabetes. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252107.v1.p1)
Diabetes_Mellitus - Flag indicating result of T2DM algorithm (Northwestern) (phv00252057.v1.p1)
Digestive_system_symptoms - Flag indicating Digestive system symptoms. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252111.v1.p1)
Diseases_Of_White_Blood_Cells - Flag indicating Diseases of the White Blood Cells. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252103.v1.p1)
Dysphagia - Flag indicating Dysphagia. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252099.v1.p1)
Emphysema - Flag indicating Emphysema. Either on problem list or >=4 dx on different days from OP/IP encounters (phv00252065.v1.p1)
End_Stage_Kidney_Disease - Flag indicating End-stage kidney disease. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252098.v1.p1)
Heart_Failure - Flag indicating Heart Failure. Either on problem list or >=4 dx on different days from OP/IP encounters (phv00252063.v1.p1)
Hepatitis_B - Flag indicating Hepatitis B. Either on problem list or >=4 dx on different days from OP/IP encounters (phv00252074.v1.p1)
Hepatitis_C - Flag indicating Hepatitis C. Either on problem list or >=4 dx on different days from OP/IP encounters (phv00252075.v1.p1)
Hodgkins_Disease - Flag indicating Hodgkins Disease. Either on problem list or >=4 dx on different days from OP/IP encounters (phv00252069.v1.p1)
Hyperthyroidism - Flag indicating Hyperthyroidism. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252092.v1.p1)
Inflammatory_Bowel_Disease - Flag indicating Inflammatory Bowel Disease. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252096.v1.p1)
Kidney_Disease - Flag indicating Kidney Disease. Either on problem list or >=4 dx on different days from OP/IP encounters (phv00252061.v1.p1)
Lactose_Intolerance - Flag indicating Lactose Intolerance. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252095.v1.p1)
Leukemia - Flag indicating Leukemia. Either on problem list or >=4 dx on different days from OP/IP encounters (phv00252067.v1.p1)
Liver_Failure - Flag indicating Liver Failure. Either on problem list or >=4 dx on different days from OP/IP encounters (phv00252072.v1.p1)
Lymphoma - Flag indicating Lymphoma. Either on problem list or >=4 dx on different days from OP/IP encounters (phv00252068.v1.p1)
Malabsorption_Celiac_Disease - Flag indicating Malabsorption / Celiac Disease. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252094.v1.p1)
Myeloma - Flag indicating Myeloma. Either on problem list or >=4 dx on different days from OP/IP encounters (phv00252070.v1.p1)
Nutrition_Metabolism_Symptoms - Flag indicating Nutrition Metabolism Symptoms. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252105.v1.p1)
PAD - Flag indicating result of PAD algorithm (Mayo) (phv00252056.v1.p1)
Pancreatitis - Flag indicating Pancreatitis. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252101.v1.p1)
Parkinsons_Disease - Flag indicating Parkinson's Disease. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252087.v1.p1)
Parvovirus - Flag indicating Parvovirus. Either on problem list or >=4 dx on different days from OP/IP encounters (phv00252076.v1.p1)
Protein_Calorie_Malnutrition - Flag indicating Protein Calorie Malnutrition. Either on problem list or >=4 dx on different days from OP/IP encounters (phv00252085.v1.p1)
Pulmonary_Disease - Flag indicating Pulmonary Disease. Either on problem list or >=4 dx on different days from OP/IP encounters (phv00252062.v1.p1)
Rheumatoid_Arthritis - Flag indicating Rheumatoid Arthritis. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252104.v1.p1)
SLE_Lupus - Flag indicating SLE/lupus. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252100.v1.p1)
TB - Flag indicating TB (Tuberculosis). Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252089.v1.p1)
Thrombocytopenia - Flag indicating Thrombocytopenia. Either on problem list or >=4 dx on different days from OP/IP encounters (phv00252077.v1.p1)
Thyroid_disorders - Flag indicating Thyroid disorders. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252109.v1.p1)

Imaging (1)

Coronary_Stenosis - Flag indicating Coronary Stenosis. Either on problem list or >=4 dx on different days from OP/IP encounters (phv00252060.v1.p1)

Medications (9)

Anti-Psychotic_Meds_Use - Flag indicating Anti-Psychotic med use. At >= 2 indications of use. Indications >= 180 days apart. (phv00252113.v1.p1)
Anticoagulent_Meds_Use - Flag indicating Anticoagulant med use. At >= 2 indications of use. Indications >= 180 days apart. (phv00252078.v1.p1)
Antihypertension_Meds_Use - Flag indicating Antihypertension med use. At >= 2 indications of use. Indications >= 180 days apart. (phv00252079.v1.p1)
Antiplatelet_Meds_Use - Flag indicating Antiplatelet med use. At >= 2 indications of use. Indications >= 180 days apart. (phv00252082.v1.p1)
Diabetes_Meds_Use - Flag indicating Diabetes med use. At >= 2 indications of use. Indications >= 180 days apart. (phv00252083.v1.p1)
Diuretics_Meds_Use - Flag indicating Diuretics med use. At >= 2 indications of use. Indications >= 180 days apart. (phv00252112.v1.p1)
Dyslipidemia_Meds_Use - Flag indicating Dyslipidemia med use. At >= 2 indications of use. Indications >= 180 days apart. (phv00252081.v1.p1)
Oral_Steroid_Meds_Use - Flag indicating oral steroid med use. At >= 2 indications of use. Indications >= 180 days apart. (phv00252114.v1.p1)
Pulmonary_Meds_Use - Flag indicating Pulmonary med use. At >= 2 indications of use. Indications >= 180 days apart. (phv00252080.v1.p1)

Mental Health (4)

Alcoholism - Flag indicating Alcoholism. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252086.v1.p1)
Anorexia - Flag indicating Anorexia. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252088.v1.p1)
Nondependent_drug_use - Flag indicating Nondependent drug use. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252106.v1.p1)
SEVERE_Depression - Flag indicating SEVERE Depression. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252091.v1.p1)

Race and Ethnicity (2)

Ethnicity - Ethnicity of participant (phv00252052.v1.p1)
Race - Race of participant (phv00252051.v1.p1)

Substance Use (1)

Smoking_Status - Flag indicating smoking status. (Passive smoking exposure is "ever") (phv00252055.v1.p1)

Other (15)

ANALYTE_TYPE - Analyte type used (phv00252116.v1.p1)
CONSENT - Subject consent information (phv00252034.v1.p1)
ExOb_Subtype - Subtype of case or control from algorithm (phv00252045.v1.p1)
General_Symptoms - Flag indicating General Symptoms. Either on problem list or >=4 dx on different days from OP/IP encounters. (phv00252108.v1.p1)
HIV - Flag indicating HIV. Either on problem list or >=4 dx on different days from OP/IP encounters (phv00252073.v1.p1)
SAMP_SOURCE - Source repository where samples originate (phv00252039.v1.p1)
SAMPID - Sample ID (phv00252038.v1.p1)
SAMPLE_USE - Sample Use (phv00252041.v1.p1)
SampleID - Sample ID (phv00252115.v1.p1)
SOURCE_SAMPID - Sample ID used in the Source Repository (phv00252040.v1.p1)
SOURCE_SUBJECT_ID - ID given by source of the subject (phv00252036.v1.p1)
SUBJECT_ID - Deidentified Subject/eMERGE ID (phv00252033.v1.p1)
SUBJECT_SOURCE - Source of the subject (phv00252035.v1.p1)
SUBJID - Deidentified Subject/eMERGE ID (phv00252042.v1.p1)
SUBJID - Subject ID (phv00252037.v1.p1)