NHGRI-Mayo Clinic Whole Genome Sequencing of Aggressive Prostate Tumors
Demographics (2)
- Age at diagnosis - Age at Diagnosis (phv00313245.v1.p1)
- Age at Surgery - Age at Surgery (phv00313248.v1.p1)
Disease Events (13)
- # Pos. L. Nodes - # Pos. L. Nodes (phv00313254.v1.p1)
- AFFECTION_STATUS - Case control status of the subject for prostate tumor (phv00313236.v1.p1)
- Est. Tumor vol(cc) - Est. Tumor vol. (cc) (phv00313255.v1.p1)
- Family history - Family History of Prostate Cancer (phv00313244.v1.p1)
- Is Tumor - Tumor status (phv00313259.v1.p1)
- Path Gleason Score - Path Gleason Score (phv00313250.v1.p1)
- Path Primary Gleason Grade - Path Primary Gleason Grade (phv00313251.v1.p1)
- Path Secondary Gleason Grade - Path Secondary Gleason Grade (phv00313252.v1.p1)
- Primary Metastatic Tumor - Primary tumor, metastasis, or transformed cell line (phv00313260.v1.p1)
- Primary Tumor Location - Primary tumor location (phv00313261.v1.p1)
- PSA at Daignosis (or closest) - Earliest prostate specific antigen (PSA) (phv00313246.v1.p1)
- Total # L. Nodes Exam - Total # L. Nodes Exam (phv00313253.v1.p1)
- Treatment Prior to Surgery - Treatment Before Sample Collection (phv00313247.v1.p1)
General Health (1)
- Lymphadenectomy - Lymphadenectomy (phv00313249.v1.p1)
Other (17)
- Analyte - Analyte Type (phv00313257.v1.p1)
- Body Site - Body site where sample was collected (phv00313258.v1.p1)
- Chemistry Version - Illumina Sequencing Chemistry Version (phv00313264.v1.p1)
- CONSENT - Consent group as determined by DAC (phv00313234.v1.p1)
- DNA Isolation Method - DNA Isolation Method (phv00313262.v1.p1)
- SAMPLE_ID - De-identified Sample ID (phv00313256.v1.p1)
- SAMPLE_ID - Sample ID (phv00313239.v1.p1)
- SAMPLE_SOURCE - Source repository where samples originate (phv00313240.v1.p1)
- SAMPLE_USE - Sample Use. Seq_DNA_SNP_CNV: SNP and CNV genotypes derived from sequence data; Seq_DNA_WholeGenome: Whole genome sequencing (phv00313242.v1.p1)
- Sequencing Center - Name of the center which conducted genotyping (phv00313265.v1.p1)
- Sequencing Platform - Sequencing Platform (phv00313263.v1.p1)
- SOURCE_SAMPLE_ID - Sample ID (phv00313241.v1.p1)
- SOURCE_SUBJECT_ID - Subject ID (phv00313237.v1.p1)
- SUBJECT_ID - Subject ID (phv00313243.v1.p1)
- SUBJECT_ID - Subject ID (phv00313233.v1.p1)
- SUBJECT_ID - Subject ID (phv00313238.v1.p1)
- SUBJECT_SOURCE - Source repository where subjects originate (phv00313235.v1.p1)