Patient-Specific Factors Influence Somatic Variations in VHL Tumors
Anthropometry (1)
- bmi - Participant's Body Mass Index (BMI) (phv00262207.v1.p1)
Demographics (2)
- age_surgery - Age of participant at time of surgery (phv00262202.v1.p1)
- sex - Sex of participant (phv00262201.v1.p1)
Disease Events (1)
- AFFECTION_STATUS - Renal tumor case control status of the subject. All subjects are VHL patients. (phv00262194.v1.p1)
Other (29)
- adj_normal_sample - Whether or not an adjacent normal kidney sample was also sequenced (phv00262209.v1.p1)
- ANALYTE_TYPE - Analyte type (phv00262222.v1.p1)
- CONSENT - Consent status (phv00262191.v1.p1)
- COVERAGE - Sequencing WGS coverage (phv00262213.v1.p1)
- EST_PURITY - Estimated tumor purity using method outlined in publication (phv00262214.v1.p1)
- est_smoking_exposure - Estimated lifetime smoking exposure rank (phv00262206.v1.p1)
- FUHRMAN_GRADE - Fuhrman grade of tumor (phv00262219.v1.p1)
- germline_vhl_mutation - Participant's germline VHL mutation (phv00262203.v1.p1)
- MANUSCRIPT_PATIENT_ID - De-identified Patient ID used in the manuscript (phv00262211.v1.p1)
- num_tumors_seq - Number of tumors/cysts sequenced in this study (phv00262208.v1.p1)
- number_of_surgeries - Participant's known other kidney surgeries (phv00262204.v1.p1)
- PRIMARY_TUMOR_LOCATION - Location of tumor in body (phv00262220.v1.p1)
- SAMPLE_FIGURE_ID - Shorthand sample ID used in publication text and figures (phv00262215.v1.p1)
- SAMPLE_ID - De-identified Sample ID (phv00262210.v1.p1)
- SAMPLE_ID - Sample ID (phv00262196.v1.p1)
- SAMPLE_SOURCE - Source repository where samples originate (phv00262197.v1.p1)
- SAMPLE_TYPE - Sample Type (phv00262212.v1.p1)
- SAMPLE_USE - Sample use. Seq_DNA_SNP: SNP genotypes derived from sequence data; Seq_DNA_WholeGenome: Whole genome sequencing (phv00262199.v1.p1)
- SEQUENCING_CENTER - Name of the center which conducted sequencing (phv00262221.v1.p1)
- smoking_status - Participant's self-reported smoking habits (phv00262205.v1.p1)
- SOURCE_SAMPLE_ID - Sample ID used in the Source Repository (phv00262198.v1.p1)
- SOURCE_SUBJECT_ID - Subject ID used in the Source Repository (phv00262193.v1.p1)
- SUBJECT_ID - De-identified Subject ID (phv00262200.v1.p1)
- SUBJECT_ID - Subject ID (phv00262190.v1.p1)
- SUBJECT_ID - Subject ID (phv00262195.v1.p1)
- SUBJECT_SOURCE - Source repository where subjects originate (phv00262192.v1.p1)
- TUMOR_DEPTH_CM - Tumor depth (phv00262218.v1.p1)
- TUMOR_LENGTH_CM - Tumor length (phv00262216.v1.p1)
- TUMOR_WIDTH_CM - Tumor width (phv00262217.v1.p1)