HNPCC-Sys: Molecular Characterization of Lynch Syndromes
Demographics (2)
- age - Subject age (phv00313207.v1.p1)
- sex - Gender of participant (phv00313208.v1.p1)
Disease Events (2)
- AFFECTION_STATUS - Case control status of the subject for hereditary nonpolyposis colorectal cancer (HNPCC) - Lynch Syndromes (phv00308166.v1.p1)
- IS_TUMOR - Tumor status (phv00308173.v1.p1)
Other (26)
- adenoma_cell_content - Estimated adenoma cell content of sequenced adenoma sample (phv00313217.v1.p1)
- ANALYTE_TYPE - Analyte Type (phv00308172.v1.p1)
- BODY_SITE - Body site where sample was collected (phv00308171.v1.p1)
- CONSENT - Consent group as determined by DAC (phv00308165.v1.p1)
- diagnosis - Diagnosis of participant (phv00313209.v1.p1)
- GENOTYPING_CENTER - Name of the center which conducted genotyping (phv00308180.v1.p1)
- HISTOLOGICAL_TYPE - Cell or tissue type or subtype of sample (phv00308174.v1.p1)
- mlh1 - Constitutional mutation in MLH1 (Entrez GeneID: 4292)? (phv00313213.v1.p1)
- msh2 - Constitutional mutation in MSH2 (Entrez GeneID: 4436)? (phv00313214.v1.p1)
- msh6 - Constitutional mutation in MSH6 (Entrez GeneID: 2956)? (phv00313215.v1.p1)
- msi_status - Microsatellite Instability (phv00313212.v1.p1)
- neoplasm_grading - Neoplasm grading (phv00313210.v1.p1)
- neoplasm_staging - Neoplasm staging (phv00313211.v1.p1)
- PRIMARY_METASTATIC_TUMOR - Primary tumor, metastasis, or transformed cell line (phv00308175.v1.p1)
- PRIMARY_TUMOR_LOCATION - Primary tumor location (phv00308176.v1.p1)
- SAMPLE_ID - De-identified Sample ID (phv00308170.v1.p1)
- SAMPLE_ID - Sample ID (phv00308168.v1.p1)
- SAMPLE_USE - Sample Use (phv00308169.v1.p1)
- SEQUENCING_CENTER - Name of the center which conducted sequencing (phv00308181.v1.p1)
- SUBJECT_ID - De-identified Subject ID (phv00313206.v1.p1)
- SUBJECT_ID - Subject ID (phv00308164.v1.p1)
- SUBJECT_ID - Subject ID (phv00308167.v1.p1)
- tumor_cell_content - Estimated tumor cell content of sequenced tumor sample (phv00313216.v1.p1)
- TUMOR_GRADE - Tumor grade of sample (phv00308178.v1.p1)
- TUMOR_STAGE - Tumor stage of sample (phv00308177.v1.p1)
- TUMOR_TREATMENT - Type of tumor treatment for sample (phv00308179.v1.p1)