Studies
Single-Cell Genomic Analysis of Gastrointestinal Cancer
Single-Cell Genomic Analysis of Gastrointestinal Cancer
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Overview
Selected Publications (5)
scPred: accurate supervised method for cell-type classification from single-cell RNA-seq data
José Alquicira-Hernández, Anuja Sathe, Hanlee P. Ji, et al.. (2019). Genome Biology. Cited 371 times.
https://doi.org/10.1186/s13059-019-1862-5
Single-Cell Genomic Characterization Reveals the Cellular Reprogramming of the Gastric Tumor Microenvironment
Anuja Sathe, Susan M. Grimes, Billy T. Lau, et al.. (2019). Clinical Cancer Research. Cited 275 times.
https://doi.org/10.1158/1078-0432.CCR-19-3231
Colorectal Cancer Metastases in the Liver Establish Immunosuppressive Spatial Networking between Tumor-Associated SPP1+ Macrophages and Fibroblasts
Anuja Sathe, Kaishu Mason, S. Grimes, et al.. (2020). Clinical Cancer Research. Cited 122 times.
https://doi.org/10.1101/2020.09.01.273672
Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions
Kaishu Mason, Anuja Sathe, Paul R Hess, et al.. (2024). Genome Biology. Cited 34 times.
https://doi.org/10.1186/s13059-023-03159-6
GITR and TIGIT immunotherapy provokes divergent multicellular responses in the tumor microenvironment of gastrointestinal cancers
Anuja Sathe, Carlos Ayala, Xiangqi Bai, et al.. (2023). Genome Medicine. Cited 21 times.
https://doi.org/10.1186/s13073-023-01259-3
