RNA Sequence-Based Analysis Used to Compare Breast Primary and Metastatic Tumor Pairs
Demographics (1)
- Gender - Participant gender (phv00421111.v1.p1)
Disease Events (5)
- AFFECTION_STATUS - Case control status of the subject for breast cancer (phv00421097.v1.p1)
- Metastatic_site - Site of Metastasis (phv00421110.v1.p1)
- Node_Status - Infiltrated lymph nodes at Primary tumor Diagnosis (Nx= not evaluated; 0= No LN metastasis; 1= Metastasis to ipsilateral, movable, axilary LNs; 2= Metastasis to ipsilateral fixed axxillary, or IM LNs; 3= Metastasis to infraclavicular/supraclavicular LN or to axillary and IM LNs) LNs+ Lymn Nodes; IM=Internal Mammary (phv00421109.v1.p1)
- P_vs_M - Primary versus Metastasis (P= Primary tumor, M= Metastatic tumor) (phv00421102.v1.p1)
- Tumor_Status - Tumor Size at Primary tumor Diagnosis(Tx= not evaluated; 1= <=2cm; 2= >2cm to <=5cm; 3= >5cm; 4=any size with direct extension to chest wall or skin) (phv00421108.v1.p1)
Other (20)
- ANALYTE_TYPE - Analyte Type (phv00421115.v1.p1)
- BODY_SITE - Body site where sample was collected (phv00421113.v1.p1)
- CONSENT - Consent group (phv00421096.v1.p1)
- ER - ER (POS=positive; NEG=negative) (phv00421103.v1.p1)
- EXTRACT_PROTOCOL - Isolation or extraction protocol (phv00421120.v1.p1)
- HER_IHC - HER2 amplification status at Primary tumor Diagnosis (0=, 1=, 2=, 3,) (phv00421106.v1.p1)
- HER2 - HER2 (POS=positive; NEG=negative) (phv00421105.v1.p1)
- HER2_FISH - HER2 amplification status at Primary tumor Diagnosis (NA=Not assessed; NO AMP= Non-amplified; AMP= Amplified; Non conlcusive) (phv00421107.v1.p1)
- HISTOLOGICAL_TYPE - Cell or tissue type or subtype of sample (phv00421116.v1.p1)
- LIBRARY_CONSTRUCTION_PROTOCOL - Preparation protocol executed before sequencing (phv00421119.v1.p1)
- Nanostring_Call - PAM50 subtype (phv00421101.v1.p1)
- NUMBER_OF_PAIR - Paired sample (phv00421114.v1.p1)
- PR - PR (POS=positive; NEG=negative) (phv00421104.v1.p1)
- SAMPLE_ID - De-identified sample ID (phv00421112.v1.p1)
- SAMPLE_ID - De-identified sample ID (phv00421099.v1.p1)
- SEQUENCING_CENTER - Name of the center which conducted sequencing (phv00421117.v1.p1)
- SUBJECT_ID - De-identified Subject ID (phv00421100.v1.p1)
- SUBJECT_ID - De-identified subject ID (phv00421095.v1.p1)
- SUBJECT_ID - De-identified subject ID (phv00421098.v1.p1)
- TISSUE_TYPE - Form of preservation and preparation for biopsy specimens (phv00421118.v1.p1)