Cell-Type Specific Effects of Genetic Variation on Chromatin Accessibility During Human Neuronal Differentiation
Demographics (1)
- Sex - Genotype detected sex (phv00427280.v1.p1)
Imaging (2)
- forward_read_length - Forward read length (phv00427293.v1.p1)
- reverse_read_length - Reverse read length (phv00427294.v1.p1)
Reproductive Health (1)
- GestationWeek - Gestation Week (phv00427281.v1.p1)
Other (27)
- alignment_software - Alignment software (phv00427296.v1.p1)
- ATACPoolID - ATAC-seq sequence pool IDs, all libraries with the same ID were sequenced together (phv00427301.v1.p1)
- CONSENT - Consent group as determined by DAC (phv00427228.v1.p1)
- description - Sample description including tissue ID and cell type (phv00427283.v1.p1)
- DiffRank - Subjective measure of cell health evaluated visually by microscopy at differentiation (phv00427303.v1.p1)
- filename - File name (phv00427297.v1.p1)
- filetype - File type (phv00427295.v1.p1)
- Genotype_ID - Subject ID (phv00427279.v1.p1)
- Genotype_ID - Genotype ID (phv00427227.v1.p1)
- Genotype_ID - Genotype ID (phv00427229.v1.p1)
- IndexBases - Sequence of sequencing index (phv00427299.v1.p1)
- IndexNum - Index number (phv00427300.v1.p1)
- instrument_model - Sequencing instrument model (phv00427291.v1.p1)
- library_layout - Library layout (phv00427289.v1.p1)
- library_source - Library source (phv00427288.v1.p1)
- library_strategy - Library preparation strategy (phv00427287.v1.p1)
- MatchedDNAID - Matched DNAID (subject ID) (VarifyBamID) (phv00427285.v1.p1)
- MatchedDonorID - Matched Donor IDs (VarifyBamID) (phv00427286.v1.p1)
- MD5_checksum - MD5 checksum number (phv00427298.v1.p1)
- platform - Sequencing platform (phv00427290.v1.p1)
- ProlifID - Cell proliferation ID (phv00427302.v1.p1)
- ProlifRank - Subjective measure of cell health evaluated visually by microscopy at proliferation (phv00427305.v1.p1)
- reference_genome_assembly - Reference genome for assembly (phv00427292.v1.p1)
- Round - Culture round IDs (phv00427304.v1.p1)
- SampleID - Sample ID (phv00427282.v1.p1)
- SampleID - Sample ID (phv00427230.v1.p1)
- Sorter - Sorter ID for neuron sorting (phv00427284.v1.p1)