LungMAP: Molecular Atlas of Lung Development - Human Lung Tissue
Anthropometry (1)
- BODY_WEIGHT - Measured body weight of sample (phv00482854.v1.p1)
Demographics (2)
- AGE - Age of subject (phv00482852.v1.p1)
- SEX - Reported sex (phv00482853.v1.p1)
Race and Ethnicity (1)
- RACE - Reported race (phv00482855.v1.p1)
Reproductive Health (2)
- CGA - Corrected gestational age is the gestational age at birth + the amount of time the infant lived. It is a measure of prematurity relating only to tissue collection from infants under 1 year. For instance, if a child who has a GA of 35 weeks at birth lives for 5 days, the CGA is 35 weeks and 5 days. This is also sometimes called postmenstrual age (PMA). (phv00482858.v1.p1)
- GA_AT_BIRTH - Gestational age at birth refers to the duration of the pregnancy and is calculated from the first day of the mother's last menstrual period. Full term is approximately 40 weeks. (phv00482857.v1.p1)
Other (24)
- ASSAY_NAME - Molecular omics profilng methodology (phv00482863.v2.p1)
- BARCODE_ID - Molecular barcode or unique identifier associated with the biological specimen (phv00482861.v2.p1)
- BATCH_ID - (OPTIONAL) Batch ID/assay specific (study specific) (phv00482869.v2.p1)
- CAUSE_OF_DEATH - Cause of subject's death (phv00482856.v1.p1)
- CLUSTER_ID - (OPTIONAL) Cell population ID (study specific) (phv00482868.v2.p1)
- CONSENT - Consent group as determined by DAC (phv00482848.v3.p1)
- GEO_ACCESSION - GEO accession ID (phv00487879.v2.p1)
- ONTOLOGY_ID - (OPTIONAL) Ontology ID associated with the cell-type or biospecimen. (phv00482872.v2.p1)
- PLATFORM_ID - Technological platform named (versioned) (phv00482864.v2.p1)
- PROTOCOL_ID - Experimental protocol URL (phv00482865.v2.p1)
- REPORTED_CELL_LINEAGE - (OPTIONAL) Study or coordinating center cell lineage notation (phv00482871.v2.p1)
- REPORTED_CELL_TYPE - (OPTIONAL) Study or coordinating center reported cell type notation (phv00482870.v2.p1)
- REPORTED_PLOT_COORDINATE_X - (OPTIONAL) Study or coordinating center dimensionality reduction X (e.g., UMAP, T-SNE) or PC1 coordinate (phv00482873.v2.p1)
- REPORTED_PLOT_COORDINATE_Y - (OPTIONAL) Study or coordinating center dimensionality reduction Y (e.g., UMAP, T-SNE) or PC2 coordinate (phv00482874.v2.p1)
- SAMPLE_ID - Clinical or animal sample identifier (Tissue Core - BRINDL or study specific) (phv00482867.v2.p1)
- SAMPLE_ID - Sample ID (phv00482850.v3.p1)
- SAMPLE_ID - Sample ID (phv00487878.v2.p1)
- SEQUENCING_PROTOCOL - (OPTIONAL) Sequencing or omics profiling technological platform (phv00482866.v2.p1)
- STUDY_ID - Study acccession number (LungMAP.net, GEO) (phv00482862.v2.p1)
- SUBJECT_ID - Subject ID (phv00482851.v1.p1)
- SUBJECT_ID - Subject ID (phv00482847.v3.p1)
- SUBJECT_ID - Subject ID (phv00482849.v3.p1)
- TYPE_OF_DEATH - Type of death, if known (phv00482860.v1.p1)
- WEIGHT_PERCENTILE - Percentile for their body weight (phv00482859.v1.p1)