California Teachers Study (CTS): Whole Genome Sequences From Under-Represented Populations

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Anthropometry (2)

  • bmi_baseline - Self-reported body mass index (kg/m2) at baseline (administered 1995) (phv00537373.v1.p1)
  • bmi_q5 - Self-reported body mass index (kg/m2) at Q5 (administered 2012) (phv00537374.v1.p1)

Demographics (3)

Disease Events (22)

  • age_cancer - Age at first incident cancer diagnosis between baseline and 12/31/2020. (phv00537381.v1.p1)
  • asthma - Participant self-reported asthma on questionnaire 3, 4, 5, or the blood draw questionnaire (phv00537399.v1.p1)
  • cancer_type - Cancer type for first incident cancer diagnosis between baseline and 12/31/2020. Other cancers with n <5 are grouped. Other cancer types diagnosed within this population include: Anus, Anal Canal and Anorectum; Gallbladder; Kidney and Renal Pelvis; Other Biliary; Other Endocrine including Thymus; Other Female Genital Organs; Other Non-Epithelial Skin; Ovary; Rectosigmoid Junction; Rectum; Small Intestine; Tonsil; Urinary Bladder; Uterus, NOS; Vulva (phv00537380.v1.p1)
  • deceased - Vital status as of end of follow-up (12/31/2020), based on annual linkages with California Vital Statistics (phv00537375.v1.p1)
  • diab - Participant self-reported diabetes on questionnaire 1, 4, 5, 6, or the blood draw questionnaire (phv00537401.v1.p1)
  • dvt - Participant self-reported deep vein thrombosis on questionnaire 5 or 6 (phv00537402.v1.p1)
  • ever_anycancer - Participant has any record of cancer as of 12/31/2020. This includes self-reported cancer on the first CTS questionnaire. (phv00537376.v1.p1)
  • ever_breastcancer - Participant has any record of breast cancer as of 12/31/2020. This includes self-reported breast cancer on the first CTS questionnaire. (phv00537377.v1.p1)
  • htak - Participant self-reported heart attack on questionnaire 1, 5, or the blood draw questionnaire (phv00537403.v1.p1)
  • hypertension - Participant self-reported hypertension on questionnaire 1, 5, 6, or the blood draw questionnaire (phv00537404.v1.p1)
  • incident_anycancer - Participant has an incident cancer diagnosis of any cancer between baseline and 12/31/2020. (phv00537378.v1.p1)
  • incident_breastcancer - Participant has an incident breast cancer diagnosis between baseline and 12/31/2020. (phv00537379.v1.p1)
  • inflammatorybowel_crohns - Participant self-reported inflammatory bowel/crohns syndrome on questionnaire 5, 6, or the blood draw questionnaire (phv00537405.v1.p1)
  • kidneydisease - Participant self-reported kidney disease on questionnaire 5 or 6 (phv00537406.v1.p1)
  • kidneystones - Participant self-reported kidney stones on questionnaire 5 or 6 (phv00537407.v1.p1)
  • lupus - Participant self-reported lupus on questionnaire 5 or the blood draw questionnaire (phv00537408.v1.p1)
  • migraines - Participant self-reported migraines on questionnaire 5 or 6 (phv00537409.v1.p1)
  • multiple_cancers - Indicator of if a participant had multiple incident cancers between baseline and 12/31/2020. (phv00537382.v1.p1)
  • parkinsons - Participant self-reported Parkinson's on questionnaire 5 or 6 (phv00537412.v1.p1)
  • psoriasis - Participant self-reported psoriasis on questionnaire 5, 6, or the blood draw questionnaire (phv00537413.v1.p1)
  • shingles - Participant self-reported shingles on questionnaire 5 or 6 (phv00537415.v1.p1)
  • stroke - Participant self-reported stroke on questionnaire 1 or 5 (phv00537416.v1.p1)

Exercise (2)

  • phys_act_baseline - Strenuous/moderate hours exercise past 3 years at baseline (administered 1995) (phv00537395.v1.p1)
  • phys_act_q5 - Strenuous/moderate hours exercise past 3 years at Q5 (administered 2012) (phv00537396.v1.p1)

General Health (3)

  • osteoarthritis - Participant self-reported osteoarthritis on questionnaire 5, 6, or the blood draw questionnaire (phv00537410.v1.p1)
  • osteoporosis - Participant self-reported osteoporosis on questionnaire 5 or 6 (phv00537411.v1.p1)
  • rheuma - Participant self-reported rheumatoid arthritis on questionnaire 5, 6, or the blood draw questionnaire (phv00537414.v1.p1)

Medications (2)

Mental Health (1)

  • depression - Participant self-reported depression on questionnaire 5 or 6 (phv00537400.v1.p1)

Race and Ethnicity (3)

  • dad_race - Participant dad's race. Participants were included in this project if at least one parent was nonwhite (phv00537372.v1.p1)
  • mom_race - Participant mom's race. Participants were included in this project if at least one parent was nonwhite (phv00537371.v1.p1)
  • race_category - Participant self-reported race combined with parents' race (phv00537370.v1.p1)

Reproductive Health (10)

  • age_menarche - Age at menarche (phv00537383.v1.p1)
  • ht - Ever used hormone therapy - incorporates participant responses from baseline through Q5 (phv00537394.v1.p1)
  • menostat_baseline - Menopausal status at baseline (administered 1995) (phv00537392.v1.p1)
  • menostat_q5 - Menopausal status at Q5 (administered 2012) (phv00537393.v1.p1)
  • oc_ever_baseline - Ever used oral contraceptives at baseline (administered 1995) (phv00537384.v1.p1)
  • oc_years_baseline - Total years used oral contraceptives at baseline (administered 1995) (phv00537385.v1.p1)
  • parity_baseline - Total number of pregnancies at baseline (administered 1995) (phv00537388.v1.p1)
  • parity_q2 - Total number of pregnancies at Q2 (administered 1997) (phv00537389.v1.p1)
  • preg_ever_baseline - Ever pregnant at baseline (administered 1995) (phv00537386.v1.p1)
  • preg_ever_thru_q4 - Participant reported ever being pregnant on questionnaire 1, 2 or 4 (phv00537387.v1.p1)

Substance Use (2)

  • alcohol_grams_baseline - Category of alcohol grams/day in the past year at baseline (administered 1995) (phv00537390.v1.p1)
  • smoke_stat_baseline - Smoking status (smoked at least 100 cigarettes in entire lifetime) at baseline (administered 1995) (phv00537391.v1.p1)

Other (17)