AC-ICAM: An Atlas and Compass of Immune-CAncer-Microbiome Interactions in Colon Cancer

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Demographics (3)

COLLECTION_AGE - Age sample was collected (phv00508188.v1.p1)
GENDER - Subjects gender (phv00508139.v1.p1)
SEX - Biological sex (phv00508134.v1.p1)

Disease Events (28)

AFFECTION_STATUS - Case control status of the subject for colon cancer (phv00508138.v1.p1)
AGE_AT_DX - Age of subject at initial pathologic diagnosis (phv00508155.v1.p1)
CAUSE_OF_DEATH - Cause of death as provided by medical records (phv00508159.v1.p1)
CLINICAL_M - Clinical Tumor Metastasis Category (cM) (phv00508151.v1.p1)
CLINICAL_N - Clinical Tumor Node Category (cN) (phv00508150.v1.p1)
CLINICAL_STAGE - Clinical Tumor Stage (cTNM) (phv00508152.v1.p1)
CLINICAL_T - Clinical Tumor Category (cT) (phv00508149.v1.p1)
DISTANT_RECURRENCE_STATUS - Indicator of distant recurrence status (phv00508167.v1.p1)
HISTOLOGICAL_TYPE - Tissue histology (phv00508187.v1.p1)
HISTORY_OF_CANCER - Prior occurance of other malignancy other than basal cell carcinoma or cervical carcinoma in situ (phv00508142.v1.p1)
IS_TUMOR - Tumor status (phv00508185.v1.p1)
LOCAL_RECURRENCE_STATUS - Indicator of local recurrence status (phv00508163.v1.p1)
LOCATION_METASTASIS_AT_DX - Anatomic location of distant metastasis present at initial diagnosis (phv00508153.v1.p1)
NEW_PRIMARY_TUMOR_IN_FU - Indicator of a new primary tumor other than basal cell carcinoma or cervical carcinoma in situ in follow up (phv00508169.v1.p1)
OS_STATUS - Overall survival status (phv00508170.v1.p1)
PATH_M - Pathological Tumor Metastasis Category (pM) (phv00508147.v1.p1)
PATH_N - Pathological Tumor Node Category (pN) (phv00508146.v1.p1)
PATH_STAGE - Pathological Tumor Stage (pTNM) (phv00508148.v1.p1)
PATH_T - Pathological Tumor Category (pT) (phv00508145.v1.p1)
PFS_STATUS - Progression Free Survival Status. (phv00508172.v1.p1)
PRIMARY_METASTATIC_NORMAL - Primary tumor, metastasis, or normal colon (phv00508181.v1.p1)
PRIMARY_TUMOR_LOCATION - Primary tumor location (phv00508186.v1.p1)
REGIONAL_RECURRENCE_STATUS - Indicator of regional recurrence status (phv00508165.v1.p1)
TUMOR_ANATOMIC_LOCATION - Anatomical location of the primary tumor (phv00508140.v1.p1)
TUMOR_MORPHOLOGY - Morphology of the primary tumor (phv00508141.v1.p1)
TUMOR_STAGE - Tumor stage of sample (phv00508189.v1.p1)
TUMOR_TREATMENT - Type of tumor treatment for sample (phv00508190.v1.p1)
VITAL_STATUS - Vital status of patient on last day of follow up (phv00508158.v1.p1)

Other (25)

ADJUVANT_TREATMENT - Treatment of colon cancer and metastasis after surgery (phv00508144.v1.p1)
ANALYTE_TYPE - Analyte type (phv00508183.v1.p1)
BIRTH_DAYS_TO - Number of days between birthday and initial pathologic diagnosis (phv00508156.v1.p1)
BODY_SITE - Body site where sample was collected (phv00508184.v1.p1)
CONSENT - Consent group as determined by DAC (phv00508133.v1.p1)
DEATH_DAYS_TO - Number of days between date of surgery and date of death (phv00508162.v1.p1)
DISTANT_RECURRENCE_DAYS_TO - Number of days between date of surgery and date of first distant recurrence (phv00508168.v1.p1)
LAST_CONTACT_DAYS_TO - Number of days between date of surgery and last day of follow up (phv00508161.v1.p1)
LOCAL_RECURRENCE_DAYS_TO - Number of days between date of surgery and date of first regional recurrence (phv00508164.v1.p1)
NEOADJUVANT_TREATED - Treatment of colon cancer prior to surgery (phv00508143.v1.p1)
OS_TIME - Number of days between date of surgery and date of death or last day of follow up (phv00508171.v1.p1)
PFS_TIME - Number of days between date of surgery and date of Event or last day of follow-up (phv00508173.v1.p1)
PORTION - Portion of the tumor (phv00508182.v1.p1)
REGIONAL_RECURRENCE_DAYS_TO - Number of days between date of surgery and date of first regional recurrence (phv00508166.v1.p1)
SAMPLE_ID - Sample ID (phv00508179.v1.p1)
SAMPLE_ID - Sample ID (phv00508136.v1.p1)
SRA_ACCESSION - SRA public sequence accession ID (SAMN#) (phv00529293.v1.p1)
SUBJECT_ID - Subject ID (phv00508137.v1.p1)
SUBJECT_ID - Subject ID (phv00508180.v1.p1)
SUBJECT_ID - Subject ID (phv00508132.v1.p1)
SUBJECT_ID - Subject ID (phv00508135.v1.p1)
SUBJECT_ID - Subject ID (phv00529292.v1.p1)
SURGERY_DAYS_TO - Number of days between initial diagnosis and day of surgery (phv00508160.v1.p1)
THERAPY_METASTASIS_AT_DX - Applied therapy to remove distant metastasis present at initial diagnosis (phv00508154.v1.p1)
YEAR_OF_DX - Year of initial diagnosis (phv00508157.v1.p1)